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Sample GSM106167 Query DataSets for GSM106167
Status Public on Sep 27, 2006
Title ALLREZ.P1
Sample type RNA
 
Source name bone marrow (cryopreserved mononuclear cells)
Organism Homo sapiens
Characteristics Age at relapse diagnosis [years]: 7.7
Sex: male
Immunophenotype: pre-B
Time of relapse: early
Site of relapse: combined BM
ALL-REZ BFM risk group: intermediate (S2)
Peripheral blast count at relapse diagnosis per microliter: 105
Minimal residual disease (after 2 induction cycles): low
Genetic features: not found
S and G2/M phase cells [%]: NA
Frontline therapy: ALL-BFM 95 SR
Extracted molecule total RNA
Label Biotin
 
Description first relapse acute lymphocytic leukemia
Data processing Probe level normalization: calibration and variance stabilization (Huber et al. PMID: 12169536). Probe-set summarization: median polish on the normalized data (Irrizary et al. PMID: 12582260).
 
Submission date Apr 21, 2006
Last update date Nov 14, 2018
Contact name Renate Kirschner-Schwabe
E-mail(s) R.Kirschner@charite.de
Phone +4930450566088
Fax +4930450566946
URL http://www.charite.de/paedonko
Organization name Charité - Universitätsmedizin Berlin
Department Pediatric Oncology/Hematology
Lab Molecular Genetics
Street address Augustenburger Platz 1
City Berlin
ZIP/Postal code 12167
Country Germany
 
Platform ID GPL96
Series (1)
GSE4698 Molecular characterization of very early relapsed childhood ALL
Relations
Reanalyzed by GSE122505

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsinh (log-like) scale

Data table
ID_REF VALUE
1007_s_at 3.09072163980975
1053_at 2.72231584272212
117_at 1.92265027841475
121_at 3.60184626440001
1255_g_at 0.910871886192722
1294_at 3.29598549457668
1316_at 1.75371534539269
1320_at 1.41473321565095
1405_i_at 1.65732600676788
1431_at 0.723500774670398
1438_at 2.25120765165152
1487_at 2.68489077443023
1494_f_at 2.34852654197285
1598_g_at 3.39894990304030
160020_at 2.9759720206005
1729_at 2.43406753919167
1773_at 1.92145159018733
177_at 1.70690120186518
179_at 3.64841336789226
1861_at 2.03838976778422

Total number of rows: 22283

Table truncated, full table size 608 Kbytes.




Supplementary file Size Download File type/resource
GSM106167.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM106167.EXP.gz 490 b (ftp)(http) EXP

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