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Sample GSM1105907 Query DataSets for GSM1105907
Status Public on Aug 17, 2014
Title skin-PBS-0W-1
Sample type RNA
 
Source name skin-PBS-0W-1
Organism Mus musculus
Characteristics strain: C3H/HeJ
tissue: skin
treatment: PBS
treatment time: 0
Extracted molecule total RNA
Extraction protocol Qiagen miRNeasy with on-column DNase digestion
Label biotin
Label protocol 3' IVT Express Kit, Affymetrix
 
Hybridization protocol Following fragmentation, 10 ug of cDNA was hybridized for 16 hr at 45C on GeneChip Mouse Genome 430 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 7G3000.
Data processing The data were analyzed with Bioconductor/R and were RMA normalized.
 
Submission date Mar 26, 2013
Last update date Aug 17, 2014
Contact name Ali Jabbari
Organization name University of Iowa
Street address 200 Hawkins Dr, 40025 PFP
City Iowa City
State/province IA
ZIP/Postal code 52242
Country USA
 
Platform ID GPL1261
Series (1)
GSE45514 Treatment of established mouse AA with topical JAK inhibitors

Data table header descriptions
ID_REF
VALUE RMA normalized log2 (expression values)

Data table
ID_REF VALUE
1415670_at 9.083637021
1415671_at 11.01378781
1415672_at 11.56967408
1415673_at 9.603331817
1415674_a_at 9.531023605
1415675_at 9.062987096
1415676_a_at 11.0467128
1415677_at 9.616751472
1415678_at 10.26763724
1415679_at 11.06378332
1415680_at 8.889892595
1415681_at 9.931594643
1415682_at 8.037920505
1415683_at 11.07990253
1415684_at 8.875587965
1415685_at 8.13842624
1415686_at 10.35305047
1415687_a_at 12.35039674
1415688_at 10.39514146
1415689_s_at 8.989679661

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM1105907_PBS-0W-1.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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