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Sample GSM1105909 Query DataSets for GSM1105909
Status Public on Aug 17, 2014
Title skin-PBS-0W-3
Sample type RNA
 
Source name skin-PBS-0W-3
Organism Mus musculus
Characteristics strain: C3H/HeJ
tissue: skin
treatment: PBS
treatment time: 0
Extracted molecule total RNA
Extraction protocol Qiagen miRNeasy with on-column DNase digestion
Label biotin
Label protocol 3' IVT Express Kit, Affymetrix
 
Hybridization protocol Following fragmentation, 10 ug of cDNA was hybridized for 16 hr at 45C on GeneChip Mouse Genome 430 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 7G3000.
Data processing The data were analyzed with Bioconductor/R and were RMA normalized.
 
Submission date Mar 26, 2013
Last update date Aug 17, 2014
Contact name Ali Jabbari
Organization name University of Iowa
Street address 200 Hawkins Dr, 40025 PFP
City Iowa City
State/province IA
ZIP/Postal code 52242
Country USA
 
Platform ID GPL1261
Series (1)
GSE45514 Treatment of established mouse AA with topical JAK inhibitors

Data table header descriptions
ID_REF
VALUE RMA normalized log2 (expression values)

Data table
ID_REF VALUE
1415670_at 9.104679767
1415671_at 11.1440267
1415672_at 11.80726562
1415673_at 9.933449635
1415674_a_at 9.706746621
1415675_at 9.062987096
1415676_a_at 11.18344568
1415677_at 9.583333223
1415678_at 10.32175936
1415679_at 11.13917608
1415680_at 8.847277974
1415681_at 9.983846326
1415682_at 8.224467612
1415683_at 11.1920985
1415684_at 9.054310922
1415685_at 8.406370683
1415686_at 10.50008083
1415687_a_at 12.48064665
1415688_at 10.51512815
1415689_s_at 9.355091138

Total number of rows: 45101

Table truncated, full table size 1025 Kbytes.




Supplementary file Size Download File type/resource
GSM1105909_PBS-0W-3.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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