|
| Status |
Public on May 31, 2013 |
| Title |
Ptbp2 KO cortex 3 [Exon] |
| Sample type |
RNA |
| |
|
| Source name |
mouse Ptbp2 knockout cortex
|
| Organism |
Mus musculus |
| Characteristics |
tissue: cortex
strain: CD1 and C57BL/6 mixed background
developmental stage: embryonic day 18.5
|
| Growth protocol |
Animals housed and timed matings performed following standard procedures. Day when copulatory plug is observed is considered embryonic day 0.5. Embryos collected at day 18.5 by caesarian section. Animals have a mixed background (CD1 and C57BL/6).
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol Extraction
|
| Label |
biotin
|
| Label protocol |
Affymetrix WT Sense Target Labeling Assay
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocol
|
| Scan protocol |
Standard Affymetrix protocol
|
| Description |
Ptbp2 KO cortex 3
|
| Data processing |
Expression Console; exon level data processed using core and extended probesets (RMA, DABG (p<0.05))
MoEx-1_0-st-v1.r2.pgf
MoEx-1_0-st-v1.r2.dt1.mm9.extended.mps
|
| |
|
| Submission date |
May 31, 2013 |
| Last update date |
May 31, 2013 |
| Contact name |
Donny D Licatalosi |
| Organization name |
Case Western Reserve University
|
| Lab |
Licatalosi
|
| Street address |
10900 Euclid Ave
|
| City |
Cleveland |
| State/province |
OH |
| ZIP/Postal code |
44106 |
| Country |
USA |
| |
|
| Platform ID |
GPL6193 |
| Series (2) |
| GSE47565 |
Wild type vs. Ptbp2 KO mouse E18.5 cortex RNA |
| GSE47567 |
Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain |
|
