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Sample GSM1187415 Query DataSets for GSM1187415
Status Public on Jul 18, 2013
Title BUP_I_1 [II]
Sample type RNA
 
Source name Striatum of 6-10 week old C57BL/6J mice
Organism Mus musculus
Characteristics strain: C57Bl/6J
timepoint: 1h
drug: Bupropion
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 5316830053_A
Data processing The data were normalised using quantile normalisation with preprocessCore in R.
 
Submission date Jul 17, 2013
Last update date Jul 18, 2013
Contact name Marcin Piechota
E-mail(s) marpiech@if-pan.krakow.pl
Phone (+4812) 6623328
Organization name Institute of Pharmacology PAS
Department Molecular Neuropharmacology
Street address Smetna 12
City Krakow
ZIP/Postal code 31-343
Country Poland
 
Platform ID GPL6887
Series (2)
GSE48954 Psychotropic drug-induced gene expression alterations in mouse striatum II
GSE48955 Psychotropic drug-induced gene expression alterations in mouse striatum

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1243094 7.707990713
ILMN_1238674 7.628717184
ILMN_2454720 7.714153052
ILMN_3062534 8.050079708
ILMN_3140158 11.16215127
ILMN_1240307 7.731843322
ILMN_1251139 7.814893095
ILMN_2935307 7.493991346
ILMN_2429159 7.73346033
ILMN_2754227 7.958080897
ILMN_1225693 7.988314203
ILMN_1234015 7.668307551
ILMN_2603725 13.04539852
ILMN_2664884 9.208148319
ILMN_1229397 9.296525457
ILMN_1225873 12.13069301
ILMN_3003575 7.424947932
ILMN_1257702 12.65526038
ILMN_2899591 10.21748915
ILMN_2658355 7.521232237

Total number of rows: 45281

Table truncated, full table size 1100 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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