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Sample GSM1187427 Query DataSets for GSM1187427
Status Public on Jul 18, 2013
Title BUP_IV_1 [II]
Sample type RNA
 
Source name Striatum of 6-10 week old C57BL/6J mice
Organism Mus musculus
Characteristics strain: C57Bl/6J
timepoint: 4h
drug: Bupropion
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 5426836047_A
Data processing The data were normalised using quantile normalisation with preprocessCore in R.
 
Submission date Jul 17, 2013
Last update date Jul 18, 2013
Contact name Marcin Piechota
E-mail(s) marpiech@if-pan.krakow.pl
Phone (+4812) 6623328
Organization name Institute of Pharmacology PAS
Department Molecular Neuropharmacology
Street address Smetna 12
City Krakow
ZIP/Postal code 31-343
Country Poland
 
Platform ID GPL6887
Series (2)
GSE48954 Psychotropic drug-induced gene expression alterations in mouse striatum II
GSE48955 Psychotropic drug-induced gene expression alterations in mouse striatum

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1243094 7.611258299
ILMN_1238674 7.029494972
ILMN_2454720 7.691627543
ILMN_3062534 8.182433886
ILMN_3140158 10.86303068
ILMN_1240307 7.967579202
ILMN_1251139 7.777545982
ILMN_2935307 7.626345715
ILMN_2429159 7.965281578
ILMN_2754227 7.864199554
ILMN_1225693 8.001237825
ILMN_1234015 7.673965961
ILMN_2603725 12.59253818
ILMN_2664884 9.274011056
ILMN_1229397 9.41341608
ILMN_1225873 12.50653661
ILMN_3003575 7.69878788
ILMN_1257702 12.21004472
ILMN_2899591 10.48938066
ILMN_2658355 7.620872599

Total number of rows: 45281

Table truncated, full table size 1100 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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