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Sample GSM1187436 Query DataSets for GSM1187436
Status Public on Jul 18, 2013
Title RIS_I_1 [II]
Sample type RNA
 
Source name Striatum of 6-10 week old C57BL/6J mice
Organism Mus musculus
Characteristics strain: C57Bl/6J
timepoint: 1h
drug: Risperidone
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 5426836048_D
Data processing The data were normalised using quantile normalisation with preprocessCore in R.
 
Submission date Jul 17, 2013
Last update date Jul 18, 2013
Contact name Marcin Piechota
E-mail(s) marpiech@if-pan.krakow.pl
Phone (+4812) 6623328
Organization name Institute of Pharmacology PAS
Department Molecular Neuropharmacology
Street address Smetna 12
City Krakow
ZIP/Postal code 31-343
Country Poland
 
Platform ID GPL6887
Series (2)
GSE48954 Psychotropic drug-induced gene expression alterations in mouse striatum II
GSE48955 Psychotropic drug-induced gene expression alterations in mouse striatum

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1243094 7.737560677
ILMN_1238674 7.522500462
ILMN_2454720 7.650465046
ILMN_3062534 8.273701048
ILMN_3140158 10.75262174
ILMN_1240307 7.803391694
ILMN_1251139 7.76799028
ILMN_2935307 7.570382112
ILMN_2429159 7.678368425
ILMN_2754227 7.864682729
ILMN_1225693 8.210939411
ILMN_1234015 7.568713773
ILMN_2603725 12.494341
ILMN_2664884 9.274685495
ILMN_1229397 9.276764356
ILMN_1225873 12.41754535
ILMN_3003575 7.732222799
ILMN_1257702 12.40826251
ILMN_2899591 10.45704452
ILMN_2658355 7.599695247

Total number of rows: 45281

Table truncated, full table size 1100 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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