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Sample GSM1187439 Query DataSets for GSM1187439
Status Public on Jul 18, 2013
Title BUP_I_2 [II]
Sample type RNA
 
Source name Striatum of 6-10 week old C57BL/6J mice
Organism Mus musculus
Characteristics strain: C57Bl/6J
timepoint: 1h
drug: Bupropion
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 5426836055_A
Data processing The data were normalised using quantile normalisation with preprocessCore in R.
 
Submission date Jul 17, 2013
Last update date Jul 18, 2013
Contact name Marcin Piechota
E-mail(s) marpiech@if-pan.krakow.pl
Phone (+4812) 6623328
Organization name Institute of Pharmacology PAS
Department Molecular Neuropharmacology
Street address Smetna 12
City Krakow
ZIP/Postal code 31-343
Country Poland
 
Platform ID GPL6887
Series (2)
GSE48954 Psychotropic drug-induced gene expression alterations in mouse striatum II
GSE48955 Psychotropic drug-induced gene expression alterations in mouse striatum

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1243094 7.641425556
ILMN_1238674 7.391732141
ILMN_2454720 7.741640469
ILMN_3062534 7.928686742
ILMN_3140158 11.00326305
ILMN_1240307 7.825725052
ILMN_1251139 7.719431954
ILMN_2935307 7.56927212
ILMN_2429159 7.779109911
ILMN_2754227 7.993083967
ILMN_1225693 8.118477948
ILMN_1234015 7.894076895
ILMN_2603725 12.68946956
ILMN_2664884 9.109254756
ILMN_1229397 9.415718105
ILMN_1225873 12.47792513
ILMN_3003575 7.86730315
ILMN_1257702 12.40826251
ILMN_2899591 10.39336176
ILMN_2658355 7.643343952

Total number of rows: 45281

Table truncated, full table size 1100 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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