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Sample GSM1187528 Query DataSets for GSM1187528
Status Public on Jul 18, 2013
Title BUS_II_3 [II]
Sample type RNA
 
Source name Striatum of 6-10 week old C57BL/6J mice
Organism Mus musculus
Characteristics strain: C57Bl/6J
timepoint: 2h
drug: Buspirone
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 5513075029_F
Data processing The data were normalised using quantile normalisation with preprocessCore in R.
 
Submission date Jul 17, 2013
Last update date Jul 18, 2013
Contact name Marcin Piechota
E-mail(s) marpiech@if-pan.krakow.pl
Phone (+4812) 6623328
Organization name Institute of Pharmacology PAS
Department Molecular Neuropharmacology
Street address Smetna 12
City Krakow
ZIP/Postal code 31-343
Country Poland
 
Platform ID GPL6887
Series (2)
GSE48954 Psychotropic drug-induced gene expression alterations in mouse striatum II
GSE48955 Psychotropic drug-induced gene expression alterations in mouse striatum

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1243094 7.453492084
ILMN_1238674 7.5368911
ILMN_2454720 7.709604351
ILMN_3062534 7.6742387
ILMN_3140158 11.31728366
ILMN_1240307 7.64501565
ILMN_1251139 7.905840066
ILMN_2935307 7.457600077
ILMN_2429159 7.844974154
ILMN_2754227 8.121006637
ILMN_1225693 7.990846849
ILMN_1234015 7.644348076
ILMN_2603725 12.9133241
ILMN_2664884 9.24009838
ILMN_1229397 9.409201962
ILMN_1225873 12.96598686
ILMN_3003575 7.425505937
ILMN_1257702 12.27388135
ILMN_2899591 10.24162
ILMN_2658355 7.703088967

Total number of rows: 45281

Table truncated, full table size 1100 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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