|
| Status |
Public on Apr 29, 2014 |
| Title |
ACC40 |
| Sample type |
genomic |
| |
|
| Source name |
ACC40
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: Adrenocortical carcinoma
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Tumor samples were powdered under liquid nitrogen. DNA was extracted and purified by cesium chloride gradient ultracentrifugation or by proteinase K digestion and ethanol extraction, followed by a clean-up step on columns (QIAGEN, Courtaboeuf, France).
|
| Label |
Cy5 and Cy3
|
| Label protocol |
standard Illumina protocol
|
| |
|
| Hybridization protocol |
standard Illumina protocol
|
| Scan protocol |
standard Illumina protocol
|
| Description |
Adrenocortical carcinoma
|
| Data processing |
standard Illumina protocol
|
| |
|
| Submission date |
Jul 26, 2013 |
| Last update date |
Apr 29, 2014 |
| Contact name |
Nabila Elarouci |
| E-mail(s) |
Nabila.Elarouci@ligue-cancer.net
|
| Organization name |
Ligue Nationale contre le Cancer
|
| Department |
Recherche
|
| Lab |
Carte d'identité des tumeurs
|
| Street address |
14 rue Corvisart
|
| City |
Paris |
| ZIP/Postal code |
75 013 |
| Country |
France |
| |
|
| Platform ID |
GPL8490 |
| Series (2) |
| GSE49277 |
Genome-scale methylome profiling of adrenocortical carcinomas (ACC) and adenomas (ACA) |
| GSE49280 |
Integrated genomic analyses of adrenocortical tumors (SNP array, DNA methylation, mRNA and miRNA expression). |
|
