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GEO accession:
Sample GSM1279951
Query DataSets for GSM1279951
Status
Public on Jan 06, 2014
Title
Normal kidney, EV002-N
Sample type
RNA
Source name
Normal kidney
Organism
Homo sapiens
Characteristics
tissue: normal adult kidney
age: 59
Sex: M
patient identifier: EV002
Growth protocol
Fresh frozen.
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted.
Label
biotin
Label protocol
Affymetrix protocol.
Hybridization protocol
Exon 1.0 ST Cocktail hybridization.
Scan protocol
PICR scanner 3000.
Description
EV002-N
Gene expression from a normal adult kidney.
Data processing
The expression values of the samples were normalized using the oligo R package.
Submission date
Dec 04, 2013
Last update date
Jan 07, 2014
Contact name
Pierre Martinez
Organization name
Cancer Research Centre of Lyon
Street address
28 rue Laennec
City
Lyon cedex 08
ZIP/Postal code
69373
Country
France
Platform ID
GPL6244
Series (1)
GSE53000
Expression data from spatially separated samples of different ccRCC patients
Data table header descriptions
ID_REF
VALUE
Log2 RMA signal (oligo::rma)
Data table
ID_REF
VALUE
7892501
3.680489012
7892502
4.566206386
7892503
3.371751555
7892504
9.427044673
7892505
3.833329207
7892506
4.857859106
7892507
5.610159209
7892508
6.915150342
7892509
11.86131554
7892510
3.741086877
7892511
4.099936284
7892512
7.730651431
7892513
3.455655093
7892514
10.87336818
7892515
10.3420691
7892516
4.870285119
7892517
6.292299388
7892518
3.005536958
7892519
6.245831279
7892520
9.932353632
Total number of rows:
33297
Table truncated, full table size
646 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1279951_EV002-N.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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