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GEO accession:
Sample GSM1279953
Query DataSets for GSM1279953
Status
Public on Jan 06, 2014
Title
Normal kidney, EV005-N
Sample type
RNA
Source name
Normal kidney
Organism
Homo sapiens
Characteristics
tissue: normal adult kidney
age: 79
Sex: F
patient identifier: EV005
Growth protocol
Fresh frozen.
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted.
Label
biotin
Label protocol
Affymetrix protocol.
Hybridization protocol
Exon 1.0 ST Cocktail hybridization.
Scan protocol
PICR scanner 3000.
Description
EV005-N
Gene expression from a normal adult kidney.
Data processing
The expression values of the samples were normalized using the oligo R package.
Submission date
Dec 04, 2013
Last update date
Jan 07, 2014
Contact name
Pierre Martinez
Organization name
Cancer Research Centre of Lyon
Street address
28 rue Laennec
City
Lyon cedex 08
ZIP/Postal code
69373
Country
France
Platform ID
GPL6244
Series (1)
GSE53000
Expression data from spatially separated samples of different ccRCC patients
Data table header descriptions
ID_REF
VALUE
Log2 RMA signal (oligo::rma)
Data table
ID_REF
VALUE
7892501
2.994603071
7892502
5.407128602
7892503
4.098897721
7892504
8.925055302
7892505
3.226871956
7892506
4.839711952
7892507
6.499556741
7892508
6.035705618
7892509
10.7813062
7892510
4.967954824
7892511
4.011608299
7892512
8.170658233
7892513
3.356454491
7892514
9.513369732
7892515
10.28515283
7892516
3.866302146
7892517
4.965424913
7892518
3.514353183
7892519
6.725265489
7892520
10.08627405
Total number of rows:
33297
Table truncated, full table size
646 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1279953_EV005-N.CEL.gz
4.3 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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