GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM1279955
Query DataSets for GSM1279955
Status
Public on Jan 06, 2014
Title
Normal kidney, RMH002-N
Sample type
RNA
Source name
Normal kidney
Organism
Homo sapiens
Characteristics
tissue: normal adult kidney
age: 63
Sex: M
patient identifier: RMH002
Growth protocol
Fresh frozen.
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted.
Label
biotin
Label protocol
Affymetrix protocol.
Hybridization protocol
Exon 1.0 ST Cocktail hybridization.
Scan protocol
PICR scanner 3000.
Description
RMH002-N
Gene expression from a normal adult kidney.
Data processing
The expression values of the samples were normalized using the oligo R package.
Submission date
Dec 04, 2013
Last update date
Jan 07, 2014
Contact name
Pierre Martinez
Organization name
Cancer Research Centre of Lyon
Street address
28 rue Laennec
City
Lyon cedex 08
ZIP/Postal code
69373
Country
France
Platform ID
GPL6244
Series (1)
GSE53000
Expression data from spatially separated samples of different ccRCC patients
Data table header descriptions
ID_REF
VALUE
Log2 RMA signal (oligo::rma)
Data table
ID_REF
VALUE
7892501
3.208401196
7892502
5.093485258
7892503
5.033643832
7892504
9.848588258
7892505
5.615248229
7892506
4.385209085
7892507
5.677688723
7892508
6.322209779
7892509
11.10432432
7892510
5.178143439
7892511
4.834455794
7892512
7.810927165
7892513
3.427418549
7892514
10.97797272
7892515
10.74850773
7892516
3.792155003
7892517
6.268556336
7892518
4.183641327
7892519
5.858376648
7892520
9.53584108
Total number of rows:
33297
Table truncated, full table size
646 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1279955_RMH002-N.CEL.gz
3.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
