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Sample GSM1279983 Query DataSets for GSM1279983
Status Public on Jan 06, 2014
Title Lymph node metastasis, EV006-LN1a
Sample type RNA
 
Source name Lymph node metastasis
Organism Homo sapiens
Characteristics tissue: clear cell renal cell carcinoma lymph node metastasis
age: 65
Sex: M
patient identifier: EV006
Growth protocol Fresh frozen.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted.
Label biotin
Label protocol Affymetrix protocol.
 
Hybridization protocol Exon 1.0 ST Cocktail hybridization.
Scan protocol PICR scanner 3000.
Description EV006-LN1a
Gene expression from a ccRCC metastasis.
Data processing The expression values of the samples were normalized using the oligo R package.
 
Submission date Dec 04, 2013
Last update date Jan 07, 2014
Contact name Pierre Martinez
Organization name Cancer Research Centre of Lyon
Street address 28 rue Laennec
City Lyon cedex 08
ZIP/Postal code 69373
Country France
 
Platform ID GPL6244
Series (1)
GSE53000 Expression data from spatially separated samples of different ccRCC patients

Data table header descriptions
ID_REF
VALUE Log2 RMA signal (oligo::rma)

Data table
ID_REF VALUE
7892501 3.08899676
7892502 6.048958936
7892503 4.70154954
7892504 8.8019428
7892505 4.042402398
7892506 5.905339949
7892507 6.184223077
7892508 7.162545576
7892509 11.33112111
7892510 5.645225695
7892511 3.868911597
7892512 6.909783803
7892513 3.077575088
7892514 11.44579129
7892515 9.786669629
7892516 4.563851612
7892517 7.093862507
7892518 3.203944866
7892519 6.018972888
7892520 9.704155775

Total number of rows: 33297

Table truncated, full table size 646 Kbytes.




Supplementary file Size Download File type/resource
GSM1279983_EV006-LN1a.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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