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Sample GSM1279997 Query DataSets for GSM1279997
Status Public on Jan 06, 2014
Title Primary tumour region, RK26-R7
Sample type RNA
 
Source name Primary tumour region
Organism Homo sapiens
Characteristics tissue: clear cell renal cell carcinoma
age: 47
Sex: M
patient identifier: RK26
Growth protocol Fresh frozen.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted.
Label biotin
Label protocol Affymetrix protocol.
 
Hybridization protocol Exon 1.0 ST Cocktail hybridization.
Scan protocol PICR scanner 3000.
Description RK26-R7
Gene expression from a primary tumour region.
Data processing The expression values of the samples were normalized using the oligo R package.
 
Submission date Dec 04, 2013
Last update date Jan 07, 2014
Contact name Pierre Martinez
Organization name Cancer Research Centre of Lyon
Street address 28 rue Laennec
City Lyon cedex 08
ZIP/Postal code 69373
Country France
 
Platform ID GPL6244
Series (1)
GSE53000 Expression data from spatially separated samples of different ccRCC patients

Data table header descriptions
ID_REF
VALUE Log2 RMA signal (oligo::rma)

Data table
ID_REF VALUE
7892501 3.680931677
7892502 5.380743271
7892503 3.146861631
7892504 9.397541746
7892505 3.66854571
7892506 5.10598986
7892507 5.457057072
7892508 7.070785717
7892509 11.45386385
7892510 5.109947453
7892511 4.542258168
7892512 7.311680633
7892513 2.991034916
7892514 11.08123691
7892515 10.58256284
7892516 5.405496902
7892517 6.598200816
7892518 3.163702712
7892519 5.66925542
7892520 9.576714327

Total number of rows: 33297

Table truncated, full table size 646 Kbytes.




Supplementary file Size Download File type/resource
GSM1279997_RK26-R7.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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