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Sample GSM1279999 Query DataSets for GSM1279999
Status Public on Jan 06, 2014
Title Primary tumour region, RK26-R10
Sample type RNA
 
Source name Primary tumour region
Organism Homo sapiens
Characteristics tissue: clear cell renal cell carcinoma
age: 47
Sex: M
patient identifier: RK26
Growth protocol Fresh frozen.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted.
Label biotin
Label protocol Affymetrix protocol.
 
Hybridization protocol Exon 1.0 ST Cocktail hybridization.
Scan protocol PICR scanner 3000.
Description RK26-R10
Gene expression from a primary tumour region.
Data processing The expression values of the samples were normalized using the oligo R package.
 
Submission date Dec 04, 2013
Last update date Jan 07, 2014
Contact name Pierre Martinez
Organization name Cancer Research Centre of Lyon
Street address 28 rue Laennec
City Lyon cedex 08
ZIP/Postal code 69373
Country France
 
Platform ID GPL6244
Series (1)
GSE53000 Expression data from spatially separated samples of different ccRCC patients

Data table header descriptions
ID_REF
VALUE Log2 RMA signal (oligo::rma)

Data table
ID_REF VALUE
7892501 3.058322777
7892502 5.249845046
7892503 3.547183215
7892504 8.435005165
7892505 3.3948201
7892506 5.115865582
7892507 6.44494402
7892508 5.244029171
7892509 11.03503928
7892510 4.498168984
7892511 3.580939872
7892512 7.258977484
7892513 3.129073564
7892514 11.18290348
7892515 10.42419028
7892516 3.777161589
7892517 5.500283769
7892518 4.563604328
7892519 5.985377403
7892520 9.606435103

Total number of rows: 33297

Table truncated, full table size 646 Kbytes.




Supplementary file Size Download File type/resource
GSM1279999_RK26-R10.CEL.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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