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Sample GSM1280015 Query DataSets for GSM1280015
Status Public on Jan 06, 2014
Title Primary tumour region, RMH008-R3
Sample type RNA
 
Source name Primary tumour region
Organism Homo sapiens
Characteristics tissue: clear cell renal cell carcinoma
age: 63
Sex: M
patient identifier: RMH008
Growth protocol Fresh frozen.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted.
Label biotin
Label protocol Affymetrix protocol.
 
Hybridization protocol Exon 1.0 ST Cocktail hybridization.
Scan protocol PICR scanner 3000.
Description RMH008-R3
Gene expression from a primary tumour region.
Data processing The expression values of the samples were normalized using the oligo R package.
 
Submission date Dec 04, 2013
Last update date Jan 07, 2014
Contact name Pierre Martinez
Organization name Cancer Research Centre of Lyon
Street address 28 rue Laennec
City Lyon cedex 08
ZIP/Postal code 69373
Country France
 
Platform ID GPL6244
Series (1)
GSE53000 Expression data from spatially separated samples of different ccRCC patients

Data table header descriptions
ID_REF
VALUE Log2 RMA signal (oligo::rma)

Data table
ID_REF VALUE
7892501 3.870907934
7892502 4.832827516
7892503 3.118260169
7892504 8.438005287
7892505 3.920860026
7892506 4.640398507
7892507 5.834191976
7892508 5.776515269
7892509 11.45737797
7892510 3.371832921
7892511 3.655216572
7892512 6.594236777
7892513 3.703139026
7892514 11.16691714
7892515 9.993728917
7892516 4.741074445
7892517 5.92721389
7892518 3.320442418
7892519 5.492081313
7892520 8.902951208

Total number of rows: 33297

Table truncated, full table size 646 Kbytes.




Supplementary file Size Download File type/resource
GSM1280015_RMH008-R3.CEL.gz 4.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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