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Sample GSM13190 Query DataSets for GSM13190
Status Public on Dec 04, 2003
Title Ileum 2C
Sample type RNA
 
Source name Whole segment, ileum, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) Pascale.Anderle@isrec.unil.ch
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL83
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_I2_ADI nat. log transformed MAS5 data
LN_I2_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_I2_ADI LN_I2_ADI_Norm
AFFX-MurIL2_at 56.2 4.029 4.048
AFFX-MurIL10_at 310.4 5.738 5.763
AFFX-MurIL4_at 159.3 5.071 5.091
AFFX-MurFAS_at 300.5 5.705 5.721
AFFX-BioB-5_at 1765.9 7.476 7.437
AFFX-BioB-M_at 3030.3 8.016 7.96
AFFX-BioB-3_at 2647 7.881 7.818
AFFX-BioC-5_at 4603.1 8.434 8.355
AFFX-BioC-3_at 4271.3 8.36 8.283
AFFX-BioDn-5_at 4128 8.326 8.252
AFFX-BioDn-3_at 19937.9 9.9 9.738
AFFX-CreX-5_at 45311.9 10.721 10.508
AFFX-CreX-3_at 72318 11.189 10.949
AFFX-BioB-5_st 500.7 6.216 6.214
AFFX-BioB-M_st 243.8 5.496 5.507
AFFX-BioB-3_st 176.4 5.173 5.198
AFFX-BioC-5_st 93.6 4.539 4.563
AFFX-BioC-3_st 186.4 5.228 5.246
AFFX-BioDn-5_st 356.4 5.876 5.901
AFFX-BioDn-3_st 557.9 6.324 6.334

Total number of rows: 11934

Table truncated, full table size 324 Kbytes.




Supplementary data files not provided

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