|
| Status |
Public on Feb 25, 2015 |
| Title |
C1498 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
C1498 clone
|
| Organism |
Mus musculus |
| Characteristics |
strain/background: C57BL/6
cell line: C1498
cell type: acute myeloid leukemia (AML) cell line
|
| Treatment protocol |
None
|
| Growth protocol |
None
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Chromosomal DNA were extracted using Qiagen DNA extraction Kit following manufacturer's instructions.
|
| Label |
Cy5
|
| Label protocol |
Probe labeling used Agilent Technologies Genomic DNA Enzymatic Labeling Kit. Labeling was performed following manufacturer's instructions.
|
| |
|
| Channel 2 |
| Source name |
T leukocytes
|
| Organism |
Mus musculus |
| Characteristics |
strain/background: C57BL/6
cell type: T lymphocytes
|
| Treatment protocol |
None
|
| Growth protocol |
None
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Chromosomal DNA were extracted using Qiagen DNA extraction Kit following manufacturer's instructions.
|
| Label |
Cy3
|
| Label protocol |
Probe labeling used Agilent Technologies Genomic DNA Enzymatic Labeling Kit. Labeling was performed following manufacturer's instructions.
|
| |
|
| |
| Hybridization protocol |
Hybridized to Agilent-027414 array.
|
| Scan protocol |
Scanned on an Agilent G2505B scanner.
Images were quantified using Agilent Feature Extraction Software (version V.10.7.3.1).
|
| Description |
mouse strain
|
| Data processing |
Agilent Feature Extraction Software (v 10.7.3.1) was used for background subtraction and LOWESS normalization.
|
| |
|
| Submission date |
Feb 25, 2014 |
| Last update date |
Feb 25, 2015 |
| Contact name |
frédéric leprêtre |
| E-mail(s) |
frederic.lepretre@univ-lille.fr
|
| Organization name |
Lille University
|
| Department |
CHU of Lille, CBP
|
| Lab |
plateforme de génomique fonctionnelle et structurale
|
| Street address |
Boulevard du Pr Leclercq
|
| City |
lille |
| ZIP/Postal code |
59037 |
| Country |
France |
| |
|
| Platform ID |
GPL10448 |
| Series (2) |
| GSE55354 |
Genomic characterization of clones derived from a murine acute myeloid leukemia cell line for the description of genes involved in immunogenicity (dataset 2) |
| GSE55355 |
Genomic characterization of clones derived from a murine acute myeloid leukemia cell line for the description of genes involved in immunogenicity |
|
