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Sample GSM137723 Query DataSets for GSM137723
Status Public on Feb 20, 2007
Title 980346T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 8025.71
SNP_A-1716667 7130.69
SNP_A-1712945 3726.61
SNP_A-1711654 20543.1
SNP_A-1717655 3047.78
SNP_A-1659842 4666.65
SNP_A-1653742 2592.7
SNP_A-1686138 6597.55
SNP_A-1696456 1239.44
SNP_A-1706789 4383.46
SNP_A-1702159 7444.35
SNP_A-1717099 6989.43
SNP_A-1692956 2622.7
SNP_A-1693565 5857.66
SNP_A-1731109 6314.26
SNP_A-1642331 6343.71
SNP_A-1713287 2275.58
SNP_A-1749711 36520.1
SNP_A-1755148 5495.24
SNP_A-1741069 542.99

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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