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Sample GSM139577 Query DataSets for GSM139577
Status Public on Dec 19, 2008
Title HB40
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.52918304525328
117_3p_at 7.86859173813559
1494_3p_f_at 8.4646800142473
1552275_3p_s_at 7.7454349268422
1552281_3p_at 9.19152293335402
1552296_3p_at 5.9528127508302
1552302_3p_at 5.85646342938553
1552311_3p_a_at 8.3459559510294
1552321_3p_a_at 4.79206046456743
1552340_3p_at 6.62671633551902
1552343_3p_s_at 7.07067565566698
1552354_3p_at 7.50845812019329
1552476_3p_s_at 7.54774769425176
1552480_3p_s_at 3.22737215698295
1552504_3p_a_at 7.59161116216231
1552518_3p_s_at 5.67428879023575
1552528_3p_at 8.37693860372696
1552535_3p_at 7.96402090834483
1552566_3p_at 6.78594941500375
1552575_3p_a_at 7.43154128435721

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139577.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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