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Sample GSM139594 Query DataSets for GSM139594
Status Public on Dec 19, 2008
Title HB57
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.9238639701361
117_3p_at 7.26437780924259
1494_3p_f_at 7.79550626693176
1552275_3p_s_at 7.17198517345011
1552281_3p_at 9.03212287624978
1552296_3p_at 6.58976952051393
1552302_3p_at 5.91536792573966
1552311_3p_a_at 8.1964668824863
1552321_3p_a_at 5.00846773616388
1552340_3p_at 6.51840874626328
1552343_3p_s_at 7.14393931077705
1552354_3p_at 7.44272147938432
1552476_3p_s_at 7.58231429870479
1552480_3p_s_at 3.44236769662278
1552504_3p_a_at 7.52779476009664
1552518_3p_s_at 5.60223385027698
1552528_3p_at 8.19895311287486
1552535_3p_at 7.91170810988433
1552566_3p_at 6.76305433037018
1552575_3p_a_at 7.34218788775085

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139594.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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