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GEO accession:
Sample GSM139601
Query DataSets for GSM139601
Status
Public on Dec 19, 2008
Title
HB64
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.86575059174822
117_3p_at
7.92359586885979
1494_3p_f_at
7.76082801076978
1552275_3p_s_at
8.13517349115484
1552281_3p_at
9.24082426870152
1552296_3p_at
6.1880323156166
1552302_3p_at
5.50019764821333
1552311_3p_a_at
8.15889786875549
1552321_3p_a_at
4.9052618323502
1552340_3p_at
6.8816616004575
1552343_3p_s_at
7.15595581889359
1552354_3p_at
6.92082922745364
1552476_3p_s_at
7.39775687529277
1552480_3p_s_at
3.63786035495179
1552504_3p_a_at
7.67702245559294
1552518_3p_s_at
5.56719226443904
1552528_3p_at
8.29377213181853
1552535_3p_at
7.92017289244736
1552566_3p_at
6.87743677110572
1552575_3p_a_at
7.2367786960423
Total number of rows:
61297
Table truncated, full table size
2187 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139601.cel.gz
8.4 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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