NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1435711 Query DataSets for GSM1435711
Status Public on Jul 12, 2014
Title Testis_TgMsi2_rep2
Sample type RNA
 
Source name Mouse testis
Organism Mus musculus
Characteristics strain: B6xCBA
age: 3 months
tissue: testis
genotype/variation: TgMsi2
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from samples using a QIAGEN RNeasy Mini Kit (Hilden, Germany). The quality and quantity of mouse total RNA was ascertained on the Agilent Bioanalyser 2100.
Label Cy3
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description comparison 2
Data processing GenomeStudio was used to convert the signal on the array into a TXT file for analysis
 
Submission date Jul 11, 2014
Last update date Jul 12, 2014
Contact name Jessie M Sutherland
E-mail(s) jessie.sutherland@newcastle.edu.au
Organization name University of Newcastle
Street address University Drive
City Callaghan
ZIP/Postal code 2304
Country Australia
 
Platform ID GPL6885
Series (1)
GSE59358 Microarray analysis of differential gene expression of whole testis extracts from transgenic Musashi-2 and transgenic Musashi-1 over-expression mice

Data table header descriptions
ID_REF
VALUE log transformed and normalized intensity

Data table
ID_REF VALUE
ILMN_2896528 10.09492348
ILMN_2721178 8.562720563
ILMN_3033922 10.16377964
ILMN_3092673 12.02488941
ILMN_2816356 7.964492967
ILMN_2808939 9.450596825
ILMN_2634564 9.556881858
ILMN_2737647 7.785341263
ILMN_2734484 10.13992293
ILMN_2952292 7.6783267
ILMN_2699078 7.578707027
ILMN_1213681 9.845941276
ILMN_2735413 7.677788048
ILMN_2735415 7.756640641
ILMN_2891688 10.18528684
ILMN_2637698 9.139291934
ILMN_2674228 8.504738687
ILMN_2601546 7.677219329
ILMN_1230831 7.551469365
ILMN_2848071 7.679682764

Total number of rows: 25697

Table truncated, full table size 624 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap