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GEO accession:
Sample GSM15294
Query DataSets for GSM15294
Status
Public on Jul 29, 2004
Title
GRO2-t5
Sample type
RNA
Source name
850 min after shift to galactose medium
Organism
Saccharomyces cerevisiae
Extracted molecule
total RNA
Description
Total RNA, in vivo labeled by run-on (GRO) using 33P-UTP, isolated from a culture of BQS252 yeast strain 850 min after shift to YPGal. Hibridization on F1 filter.
Submission date
Jan 16, 2004
Last update date
Dec 31, 2008
Contact name
Jose E. Perez-Ortin
E-mail(s)
jose.e.perez@uv.es
Phone
34 963 543467
Organization name
Universitat de Valencia
Department
Bioquimica y Biologia Molecular
Lab
Yeast Functional Genomics (GFL)
Street address
Dr. Moliner 50
City
Burjassot
State/province
Valencia
ZIP/Postal code
E46100
Country
Spain
Platform ID
GPL772
Series (2)
GSE1002
Genomic Run-On (GRO) experiment for the YPD to YPGal time course
GSE14084
Gene category-specific regulation of transcription elongation across the yeast genome
Data table header descriptions
ID_REF
signal_raw t5-2
raw signal for GRO hybridization sample t5 replicate 2
bkgd_raw t5-2
background for raw signal for GRO hybridization sample t5 replicate 2
VALUE
signal intensity (background substracted) for sample t5 replicate 2
Data table
ID_REF
signal_raw t5-2
bkgd_raw t5-2
VALUE
R1 - C1 : 1
20.25
17.303
2.945
R1 - C1 : 10
139.17
17.303
121.866
R1 - C1 : 11
21.18
17.303
3.872
R1 - C1 : 12
44.9
17.303
27.601
R1 - C1 : 13
22.49
17.303
5.185
R1 - C1 : 14
21.63
17.303
4.33
R1 - C1 : 15
29.68
17.303
12.38
R1 - C1 : 16
69.49
17.303
52.187
R1 - C1 : 2
22.13
17.303
4.831
R1 - C1 : 3
32.12
17.303
14.817
R1 - C1 : 4
25.09
17.303
7.79
R1 - C1 : 5
20.59
17.303
3.285
R1 - C1 : 6
19.35
17.303
2.05
R1 - C1 : 7
27.02
17.303
9.712
R1 - C1 : 8
22.65
17.303
5.347
R1 - C1 : 9
34.56
17.303
17.259
R1 - C10 : 1
232.59
21.242
211.348
R1 - C10 : 10
212.43
21.242
191.192
R1 - C10 : 11
30.14
21.242
8.893
R1 - C10 : 12
89.4
21.242
68.16
Total number of rows:
6144
Table truncated, full table size
199 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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