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Sample GSM1548077 Query DataSets for GSM1548077
Status Public on Nov 18, 2014
Title H11A1
Sample type RNA
 
Source name HMLE tumors
Organism Homo sapiens
Characteristics gender: female
cell line: HMLE
genotype/variation: BCL11A overexpression
Treatment protocol Overexpression of BCL11A (DOX inducible)
Growth protocol HMLE cells were cultrured in HUMEC media prior to injection into NOD-SCID mice
Extracted molecule total RNA
Extraction protocol RNA from QIAGEN RNA prep kit
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 5753685039_B
rep1
Data processing All data were normalized and scaled by Partek Genomic Suite 6.4.
 
Submission date Nov 18, 2014
Last update date Nov 18, 2014
Contact name Jack Chen
Organization name NIH
Street address SAIC-Frederick Miller Dr
City Frederick
State/province MD
ZIP/Postal code 21702
Country USA
 
Platform ID GPL10904
Series (1)
GSE63386 BCL11A is a triple-negative breast cancer gene with critical functions in stem and progenitor cells

Data table header descriptions
ID_REF
VALUE normalized, scaled signal
Detection p-value

Data table
ID_REF VALUE Detection p-value
7A5 157.556 0.9039
A1BG 155.744 0.90194
A1CF 129.333 0.63063
A26C3 130.644 0.7117
A2BP1 97.9444 0.12893
A2LD1 120.2 0.40649
A2M 70.8111 0.09481
A2ML1 240.589 1
A3GALT2 136.789 0.7486
A4GALT 242.489 1
A4GNT 110.178 0.32078
AAA1 125.367 0.69534
AAAS 174.411 0.97403
AACS 298.156 1
AACSL 169.589 0.96494
AADAC 155.2 0.88312
AADACL1 401.944 1
AADACL2 190.2 0.99221
AADACL3 119.844 0.4013
AADACL4 76.6333 0.15195

Total number of rows: 34602

Table truncated, full table size 758 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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