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Sample GSM1548078 Query DataSets for GSM1548078
Status Public on Nov 18, 2014
Title H11A2
Sample type RNA
 
Source name HMLE tumors
Organism Homo sapiens
Characteristics gender: female
cell line: HMLE
genotype/variation: BCL11A overexpression
Treatment protocol Overexpression of BCL11A (DOX inducible)
Growth protocol HMLE cells were cultrured in HUMEC media prior to injection into NOD-SCID mice
Extracted molecule total RNA
Extraction protocol RNA from QIAGEN RNA prep kit
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 5753685039_D
rep2
Data processing All data were normalized and scaled by Partek Genomic Suite 6.4.
 
Submission date Nov 18, 2014
Last update date Nov 18, 2014
Contact name Jack Chen
Organization name NIH
Street address SAIC-Frederick Miller Dr
City Frederick
State/province MD
ZIP/Postal code 21702
Country USA
 
Platform ID GPL10904
Series (1)
GSE63386 BCL11A is a triple-negative breast cancer gene with critical functions in stem and progenitor cells

Data table header descriptions
ID_REF
VALUE normalized, scaled signal
Detection p-value

Data table
ID_REF VALUE Detection p-value
7A5 177.878 0.96494
A1BG 146.867 0.87304
A1CF 119.1 0.45333
A26C3 120.144 0.53697
A2BP1 97.3111 0.08156
A2LD1 132.211 0.53896
A2M 70.9222 0.08312
A2ML1 141.811 0.67922
A3GALT2 151.578 0.90309
A4GALT 552.022 1
A4GNT 140.167 0.65195
AAA1 115.633 0.39994
AAAS 223.989 1
AACS 417.522 1
AACSL 198.422 0.9961
AADAC 155.8 0.84416
AADACL1 399 1
AADACL2 147.1 0.74935
AADACL3 145.056 0.72468
AADACL4 87.7667 0.22338

Total number of rows: 34602

Table truncated, full table size 758 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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