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GEO accession:
Sample GSM15629
Query DataSets for GSM15629
Status
Public on Jan 30, 2004
Title
ATRA_24hr_1
Sample type
RNA
Source name
HL-60 cells treated with ATRA
Organism
Homo sapiens
Extracted molecule
total RNA
Description
HL-60 cells purchased from ATCC and treated with 1 uM ATRA for 24 hours. RNA extraction, target preparation and hybridization as described in Stegmaier et al., Nature Genetics 2004.
Keywords = HL-60
Keywords = leukemia
Keywords = AML
Submission date
Jan 21, 2004
Last update date
May 28, 2005
Contact name
Ken Ross
E-mail(s)
kross@broadinstitute.org
Phone
617-714-7473
Fax
617-714-8955
URL
http://www.broad.mit.edu/cancer/
Organization name
Broad Institute
Department
Cancer Genomics
Lab
Golub Lab
Street address
7 Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL80
Series (2)
GSE985
Gene Expression-Based High Throughput Screening: HL-60 Cells Treated with ATRA and PMA
GSE995
Differentiation of acute myeloid leukemia cells
Data table header descriptions
ID_REF
VALUE
Affymetrix GeneChip MAS4 Average Difference
ABS_CALL
Affymetrix GeneChip MAS4 A,M, or P Call
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
-209.7
A
AFFX-BioB-M_at
-882.0
A
AFFX-BioB-3_at
-1.0
A
AFFX-BioC-5_at
720.5
P
AFFX-BioC-3_at
-604.1
A
AFFX-BioDn-5_at
-522.7
A
AFFX-BioDn-3_at
1492.6
A
AFFX-CreX-5_at
-770.3
A
AFFX-CreX-3_at
202.0
A
AFFX-BioB-5_st
890.4
A
AFFX-BioB-M_st
-397.7
A
AFFX-BioB-3_st
-1061.4
A
AFFX-BioC-5_st
-908.3
A
AFFX-BioC-3_st
-309.9
A
AFFX-BioDn-5_st
194.8
A
AFFX-BioDn-3_st
-88.8
A
AFFX-CreX-5_st
52.4
A
AFFX-CreX-3_st
-118.1
A
hum_alu_at
245583.2
P
AFFX-DapX-5_at
-295.5
A
Total number of rows:
7129
Table truncated, full table size
137 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM15629.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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