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Sample GSM15633

Query DataSets for GSM15633

Status

Public on Jan 30, 2004

Title

ATRA_5d_1

Sample type

RNA

Source name

HL-60 cells treated with ATRA

Organism

Homo sapiens

Extracted molecule

total RNA

Description

HL-60 cells purchased from ATCC and treated with 1 uM ATRA for 5 days. RNA extraction, target preparation and hybridization as described in Stegmaier et al., Nature Genetics 2004.
Keywords = HL-60
Keywords = leukemia
Keywords = AML

Submission date

Jan 21, 2004

Last update date

May 28, 2005

Contact name

Ken Ross

E-mail(s)

kross@broadinstitute.org

Phone

617-714-7473

Fax

617-714-8955

URL

http://www.broad.mit.edu/cancer/

Organization name

Broad Institute

Department

Cancer Genomics

Lab

Golub Lab

Street address

7 Cambridge Center

City

Cambridge

State/province

ZIP/Postal code

02142

Country

USA

Platform ID

GPL80

Series (2)

GSE985	Gene Expression-Based High Throughput Screening: HL-60 Cells Treated with ATRA and PMA
GSE995	Differentiation of acute myeloid leukemia cells

Data table header descriptions
ID_REF
VALUE	Affymetrix GeneChip MAS4 Average Difference
ABS_CALL	Affymetrix GeneChip MAS4 A,M, or P Call

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	-10.6	A
AFFX-BioB-M_at	-47.0	A
AFFX-BioB-3_at	8.5	A
AFFX-BioC-5_at	-0.4	A
AFFX-BioC-3_at	-28.4	A
AFFX-BioDn-5_at	-103.2	A
AFFX-BioDn-3_at	88.0	A
AFFX-CreX-5_at	-24.4	A
AFFX-CreX-3_at	-5.1	A
AFFX-BioB-5_st	83.8	A
AFFX-BioB-M_st	4.6	A
AFFX-BioB-3_st	-104.0	A
AFFX-BioC-5_st	-175.9	A
AFFX-BioC-3_st	-27.4	A
AFFX-BioDn-5_st	-52.6	A
AFFX-BioDn-3_st	-30.1	A
AFFX-CreX-5_st	16.7	A
AFFX-CreX-3_st	-33.4	A
hum_alu_at	16940.3	P
AFFX-DapX-5_at	-81.3	A

Total number of rows: 7129

Table truncated, full table size 130 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM15633.CEL.gz	2.1 Mb	(ftp)(http)	CEL
Processed data included within Sample table