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Sample GSM15699 Query DataSets for GSM15699
Status Public on Jan 27, 2004
Title CurrentSmoker 77
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) aspira@bu.edu
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1562.800 0.000388
1053_at 21.800 0.320830
117_at 33.300 0.234557
121_at 398.200 0.011447
1255_g_at 15.600 0.458816
1294_at 223.900 0.013092
1316_at 71.600 0.005643
1320_at 16.400 0.438361
1405_i_at 184.100 0.003159
1431_at 21.900 0.073830
1438_at 28.700 0.438361
1487_at 249.800 0.066865
1494_f_at 176.500 0.011447
1598_g_at 339.500 0.021866
160020_at 264.000 0.019304
1729_at 156.000 0.019304
1773_at 15.300 0.602006
177_at 61.400 0.073830
179_at 477.200 0.066865
1861_at 117.000 0.031336

Total number of rows: 22215

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM15699.CEL.gz 3.3 Mb (ftp)(http) CEL

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