|
Status |
Public on Dec 24, 2014 |
Title |
Tumor_MSC_WT_1 |
Sample type |
RNA |
|
|
Source name |
tumor from WT MSC
|
Organism |
Mus musculus |
Characteristics |
tumor initiating cells: WT mammary stem cells strain: FVB/N
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
Label |
Biotin
|
Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
CD24lowCD49fhi Z-10
|
Data processing |
The data were normalised using quantile normalisation with IlluminaGUI in R
|
|
|
Submission date |
Dec 23, 2014 |
Last update date |
Dec 24, 2014 |
Contact name |
Weizhou Zhang |
E-mail(s) |
weizhou-zhang@uiowa.edu
|
Phone |
3193358214
|
Organization name |
The University of Iowa
|
Department |
Pathology
|
Lab |
Zhang Lab
|
Street address |
100 Medical Laboratories
|
City |
Iowa City |
State/province |
IA |
ZIP/Postal code |
52242 |
Country |
USA |
|
|
Platform ID |
GPL18752 |
Series (1) |
GSE64487 |
Genome-wide transcript analysis of ErbB2-induced tumors from different tumor-initiating cells |
|