|
| Status |
Public on Dec 24, 2014 |
| Title |
Tumor_MSC_WT_1 |
| Sample type |
RNA |
| |
|
| Source name |
tumor from WT MSC
|
| Organism |
Mus musculus |
| Characteristics |
tumor initiating cells: WT mammary stem cells
strain: FVB/N
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
Biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
CD24lowCD49fhi
Z-10
|
| Data processing |
The data were normalised using quantile normalisation with IlluminaGUI in R
|
| |
|
| Submission date |
Dec 23, 2014 |
| Last update date |
Dec 24, 2014 |
| Contact name |
Weizhou Zhang |
| E-mail(s) |
weizhou-zhang@uiowa.edu
|
| Phone |
3193358214
|
| Organization name |
The University of Iowa
|
| Department |
Pathology
|
| Lab |
Zhang Lab
|
| Street address |
100 Medical Laboratories
|
| City |
Iowa City |
| State/province |
IA |
| ZIP/Postal code |
52242 |
| Country |
USA |
| |
|
| Platform ID |
GPL18752 |
| Series (1) |
| GSE64487 |
Genome-wide transcript analysis of ErbB2-induced tumors from different tumor-initiating cells |
|
