GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158286
Query DataSets for GSM158286
Status
Public on Nov 23, 2007
Title
HB99bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.35144567676225
117_3p_at
7.97733837454001
1494_3p_f_at
7.6544917912247
1552275_3p_s_at
7.91331786507626
1552281_3p_at
9.23101635355131
1552296_3p_at
6.25821004167317
1552302_3p_at
5.76039923247132
1552311_3p_a_at
8.19552381930668
1552321_3p_a_at
5.28920666202734
1552340_3p_at
6.63687192560842
1552343_3p_s_at
6.65154633343137
1552354_3p_at
8.36299570604084
1552476_3p_s_at
8.2560457660715
1552480_3p_s_at
4.0769904233066
1552504_3p_a_at
7.87780051362628
1552518_3p_s_at
5.80618747956601
1552528_3p_at
8.03748277092178
1552535_3p_at
7.78278406441019
1552566_3p_at
6.4130868409974
1552575_3p_a_at
8.98811952539189
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158286.CEL.gz
8.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
