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GEO accession:
Sample GSM158299
Query DataSets for GSM158299
Status
Public on Nov 23, 2007
Title
HB112
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
10.3397581654292
117_3p_at
8.24441122750948
1494_3p_f_at
6.89777265874663
1552275_3p_s_at
8.38991227825704
1552281_3p_at
9.24926904933792
1552296_3p_at
6.18630332144609
1552302_3p_at
5.79321653856789
1552311_3p_a_at
8.6344934571696
1552321_3p_a_at
4.54020672000143
1552340_3p_at
6.25294762562668
1552343_3p_s_at
7.76210295211441
1552354_3p_at
7.24973196187051
1552476_3p_s_at
7.68000171765512
1552480_3p_s_at
3.90676196334485
1552504_3p_a_at
7.24327866845421
1552518_3p_s_at
6.02060566393474
1552528_3p_at
8.22708105388321
1552535_3p_at
7.73216291324859
1552566_3p_at
6.73441252281998
1552575_3p_a_at
9.13030781454853
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158299.CEL.gz
9.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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