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Sample GSM1617530 Query DataSets for GSM1617530
Status Public on May 12, 2015
Title 06-0006
Sample type RNA
 
Source name Whole Blood
Organism Homo sapiens
Characteristics tissue: whole blood
icu_day: 1
disease: SepticShock
Treatment protocol See original GSEs for clinical and technical information.
Extracted molecule total RNA
Extraction protocol See original GSEs for clinical and technical information.
Label biotin
Label protocol See original GSEs for clinical and technical information.
 
Hybridization protocol See original GSEs for clinical and technical information.
Scan protocol See original GSEs for clinical and technical information.
Description gcRMA normalized
Data processing All samples here were downloaded as .CEL files and re-normalized together using gcRMA using R package 'affy'.
 
Submission date Feb 23, 2015
Last update date Nov 30, 2020
Contact name Timothy E Sweeney
Organization name Stanford University
Department Biomedical Informatics
Lab Khatri Lab
Street address 1265 Welch Road, MSOB
City Stanford
State/province California
ZIP/Postal code 94305
Country USA
 
Platform ID GPL570
Series (1)
GSE66099 Unique Patients from the Genomics of Pediatric SIRS and Septic Shock Investigators (GPSSSI)
Relations
Reanalysis of GSM103010
Reanalyzed by GSE162329

Data table header descriptions
ID_REF
VALUE gcRMA normalized gene expression values

Data table
ID_REF VALUE
1007_s_at 2.575063519
1053_at 4.687318103
117_at 6.520927264
121_at 3.390653877
1255_g_at 1.773050824
1294_at 3.001253878
1316_at 3.003081795
1320_at 2.072747809
1405_i_at 9.360717673
1431_at 1.717436364
1438_at 1.940421027
1487_at 4.928850246
1494_f_at 2.118370317
1552256_a_at 3.171879042
1552257_a_at 3.142356838
1552258_at 2.528432897
1552261_at 2.630305112
1552263_at 8.168193296
1552264_a_at 8.095180711
1552266_at 2.149580688

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1617530_GSM103010.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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