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Sample GSM1617617 Query DataSets for GSM1617617
Status Public on May 12, 2015
Title 04-0007
Sample type RNA
 
Source name Whole Blood
Organism Homo sapiens
Characteristics tissue: whole blood
icu_day: 1
disease: SIRS
Treatment protocol See original GSEs for clinical and technical information.
Extracted molecule total RNA
Extraction protocol See original GSEs for clinical and technical information.
Label biotin
Label protocol See original GSEs for clinical and technical information.
 
Hybridization protocol See original GSEs for clinical and technical information.
Scan protocol See original GSEs for clinical and technical information.
Description gcRMA normalized
Data processing All samples here were downloaded as .CEL files and re-normalized together using gcRMA using R package 'affy'.
 
Submission date Feb 23, 2015
Last update date May 12, 2015
Contact name Timothy E Sweeney
Organization name Stanford University
Department Biomedical Informatics
Lab Khatri Lab
Street address 1265 Welch Road, MSOB
City Stanford
State/province California
ZIP/Postal code 94305
Country USA
 
Platform ID GPL570
Series (1)
GSE66099 Unique Patients from the Genomics of Pediatric SIRS and Septic Shock Investigators (GPSSSI)
Relations
Reanalysis of GSM350214

Data table header descriptions
ID_REF
VALUE gcRMA normalized gene expression values

Data table
ID_REF VALUE
1007_s_at 2.792326556
1053_at 4.549019893
117_at 8.167531512
121_at 3.295351736
1255_g_at 2.069020542
1294_at 3.809718985
1316_at 3.690408759
1320_at 2.204970573
1405_i_at 10.50425224
1431_at 1.656809201
1438_at 2.066560436
1487_at 4.629114203
1494_f_at 2.49414254
1552256_a_at 3.265887365
1552257_a_at 3.276063079
1552258_at 3.058837622
1552261_at 2.022165621
1552263_at 9.414752549
1552264_a_at 8.990301746
1552266_at 2.130805137

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1617617_GSM350214.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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