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Sample GSM1617689 Query DataSets for GSM1617689
Status Public on May 12, 2015
Title 22-0013
Sample type RNA
 
Source name Whole Blood
Organism Homo sapiens
Characteristics tissue: whole blood
icu_day: 1
disease: Control
Treatment protocol See original GSEs for clinical and technical information.
Extracted molecule total RNA
Extraction protocol See original GSEs for clinical and technical information.
Label biotin
Label protocol See original GSEs for clinical and technical information.
 
Hybridization protocol See original GSEs for clinical and technical information.
Scan protocol See original GSEs for clinical and technical information.
Description gcRMA normalized
Data processing All samples here were downloaded as .CEL files and re-normalized together using gcRMA using R package 'affy'.
 
Submission date Feb 23, 2015
Last update date Nov 30, 2020
Contact name Timothy E Sweeney
Organization name Stanford University
Department Biomedical Informatics
Lab Khatri Lab
Street address 1265 Welch Road, MSOB
City Stanford
State/province California
ZIP/Postal code 94305
Country USA
 
Platform ID GPL570
Series (1)
GSE66099 Unique Patients from the Genomics of Pediatric SIRS and Septic Shock Investigators (GPSSSI)
Relations
Reanalysis of GSM647590
Reanalyzed by GSE162329

Data table header descriptions
ID_REF
VALUE gcRMA normalized gene expression values

Data table
ID_REF VALUE
1007_s_at 3.325424581
1053_at 5.016981879
117_at 7.231001196
121_at 3.294250251
1255_g_at 2.011219579
1294_at 4.062002727
1316_at 2.973412443
1320_at 1.780864865
1405_i_at 11.61889794
1431_at 1.951481846
1438_at 1.637986827
1487_at 4.947490917
1494_f_at 1.77875711
1552256_a_at 3.743344677
1552257_a_at 3.142007582
1552258_at 2.143434578
1552261_at 1.846633948
1552263_at 8.38285023
1552264_a_at 7.271354033
1552266_at 1.897706382

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1617689_GSM647590.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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