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Sample GSM172173 Query DataSets for GSM172173
Status Public on Nov 02, 2007
Title LowLonely 1
Sample type RNA
 
Source name Peripheral blood leukocytes from individuals with low levels of social isolation
Organism Homo sapiens
Characteristics LowLonely
Extracted molecule total RNA
Extraction protocol Peripheral blood leukocytes were isolated from fresh whole blood by ficol density gradient, and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
 
Hybridization protocol Standard Affymetrix hybridization protocol for gen expression profiling (carried out in UCLA DNA Microarray Core).
Scan protocol Standard Affymetrixscan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
Description Affymetrix U133A
Data processing RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
 
Submission date Feb 27, 2007
Last update date May 03, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL96
Series (1)
GSE7148 Differential gene expression in peripheral blood leukocytes from CHASRS particpants

Data table header descriptions
ID_REF
VALUE Log2 metric RMA expression estimate.

Data table
ID_REF VALUE
220532_s_at 7.372817
221491_x_at 5.390868
201694_s_at 5.649308
218345_at 6.979072
208151_x_at 6.617067
208719_s_at 5.889684
202859_x_at 4.962201
201693_s_at 4.685631
203290_at 5.073418
209156_s_at 6.299179
210095_s_at 7.043214
205114_s_at 6.426118
213524_s_at 4.942614
218136_s_at 5.481274
202768_at 4.750536
204748_at 4.213387
211506_s_at 4.350102
209788_s_at 8.254078
206115_at 3.947036
201082_s_at 5.951503

Total number of rows: 22283

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM172173.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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