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Sample GSM172175 Query DataSets for GSM172175
Status Public on Nov 02, 2007
Title LowLonely 3
Sample type RNA
 
Source name Peripheral blood leukocytes from individuals with low levels of social isolation
Organism Homo sapiens
Characteristics LowLonely
Extracted molecule total RNA
Extraction protocol Peripheral blood leukocytes were isolated from fresh whole blood by ficol density gradient, and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
 
Hybridization protocol Standard Affymetrix hybridization protocol for gen expression profiling (carried out in UCLA DNA Microarray Core).
Scan protocol Standard Affymetrixscan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
Description Affymetrix U133A
Data processing RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
 
Submission date Feb 27, 2007
Last update date May 03, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL96
Series (1)
GSE7148 Differential gene expression in peripheral blood leukocytes from CHASRS particpants

Data table header descriptions
ID_REF
VALUE Log2 metric RMA expression estimate.

Data table
ID_REF VALUE
220532_s_at 9.103888
221491_x_at 8.146752
201694_s_at 5.539429
218345_at 8.370933
208151_x_at 6.749508
208719_s_at 5.658947
202859_x_at 8.114948
201693_s_at 5.149832
203290_at 5.32425
209156_s_at 5.952433
210095_s_at 5.470844
205114_s_at 6.265079
213524_s_at 7.259102
218136_s_at 5.994011
202768_at 4.907018
204748_at 4.741188
211506_s_at 5.133514
209788_s_at 7.941898
206115_at 4.020055
201082_s_at 5.606849

Total number of rows: 22283

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM172175.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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