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Sample GSM172180 Query DataSets for GSM172180
Status Public on Nov 02, 2007
Title LowLonely 8
Sample type RNA
 
Source name Peripheral blood leukocytes from individuals with low levels of social isolation
Organism Homo sapiens
Characteristics LowLonely
Extracted molecule total RNA
Extraction protocol Peripheral blood leukocytes were isolated from fresh whole blood by ficol density gradient, and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
 
Hybridization protocol Standard Affymetrix hybridization protocol for gen expression profiling (carried out in UCLA DNA Microarray Core).
Scan protocol Standard Affymetrixscan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
Description Affymetrix U133A
Data processing RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
 
Submission date Feb 27, 2007
Last update date May 03, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL96
Series (1)
GSE7148 Differential gene expression in peripheral blood leukocytes from CHASRS particpants

Data table header descriptions
ID_REF
VALUE Log2 metric RMA expression estimate.

Data table
ID_REF VALUE
220532_s_at 6.264281
221491_x_at 6.160692
201694_s_at 6.645231
218345_at 6.879813
208151_x_at 6.137511
208719_s_at 5.528286
202859_x_at 8.022045
201693_s_at 5.013728
203290_at 9.109915
209156_s_at 5.465808
210095_s_at 6.122172
205114_s_at 7.393615
213524_s_at 6.346334
218136_s_at 5.132684
202768_at 5.126572
204748_at 4.734048
211506_s_at 6.533269
209788_s_at 7.242419
206115_at 4.05341
201082_s_at 4.988535

Total number of rows: 22283

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM172180.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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