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Sample GSM173093 Query DataSets for GSM173093
Status Public on Apr 04, 2007
Title Rice OsSRT1 RNAi transgenic line LM2
Sample type RNA
 
Source name Rice OsSRT1 RNAi transgenic line LM2
Organism Oryza sativa
Characteristics OsSRT1 RNAi transgenic line LM1
Age:11 days
Extracted molecule total RNA
Extraction protocol RNA was extracted using TRIzol (Invitrogen, Carlsbad, CA, USA) as described by the manufacturer.
Label biotin
Label protocol standard Affymetrix procedures
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Rice OsSRT1 RNAi transgenic line
Data processing GCOS 1.2
 
Submission date Mar 06, 2007
Last update date Apr 04, 2007
Contact name Qianwen Sun
E-mail(s) sunqianwen@webmail.hzau.edu.cn
Phone 862787281800
URL http://redb.ncpgr.cn/
Organization name Huazhong Agriculture University
Department National Key Laboratory of Crop Genetic Improvement
Lab Gene Center
Street address Luoshi Road
City Wuhan
State/province Hubei
ZIP/Postal code 430070
Country China
 
Platform ID GPL2025
Series (1)
GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice

Data table header descriptions
ID_REF
VALUE GCOS 1.2
ABS_CALL Rice-LM2
DETECTION P-VALUE Rice-LM2

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 102.745 P 5.16732e-05
AFFX-BioB-M_at 144.846 P 4.42873e-05
AFFX-BioB-3_at 166.134 P 5.16732e-05
AFFX-BioC-5_at 340.162 P 4.42873e-05
AFFX-BioC-3_at 370.001 P 4.42873e-05
AFFX-BioDn-5_at 628.753 P 4.42873e-05
AFFX-BioDn-3_at 1672.08 P 4.42873e-05
AFFX-CreX-5_at 4671.55 P 4.42873e-05
AFFX-CreX-3_at 5998.91 P 4.42873e-05
AFFX-DapX-5_at 128.035 P 0.00010954
AFFX-DapX-M_at 366.015 P 5.16732e-05
AFFX-DapX-3_at 915.466 P 4.42873e-05
AFFX-LysX-5_at 40.2034 P 4.42873e-05
AFFX-LysX-M_at 72.2467 P 7.00668e-05
AFFX-LysX-3_at 144.564 P 0.000126798
AFFX-PheX-5_at 61.5253 P 5.16732e-05
AFFX-PheX-M_at 58.1413 P 5.16732e-05
AFFX-PheX-3_at 112.289 P 7.00668e-05
AFFX-ThrX-5_at 39.1477 P 0.000224668
AFFX-ThrX-M_at 107.029 P 6.02111e-05

Total number of rows: 57381

Table truncated, full table size 2181 Kbytes.




Supplementary file Size Download File type/resource
GSM173093.CEL.gz 4.4 Mb (ftp)(http) CEL
GSM173093.EXP.gz 506 b (ftp)(http) EXP
GSM173093.jpg.gz 135.4 Kb (ftp)(http) JPG

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