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Sample GSM176209 Query DataSets for GSM176209
Status Public on Apr 09, 2007
Title Spinal Cord 9 Normal
Sample type RNA
 
Source name Male/Female; Normal/Diseased
Organism Homo sapiens
Characteristics Tissue/Cell Line [C]: spinal_cord
Disease/Normal or Treatment [C]: normal
Gender: F
Disease type: Normal
Treatment protocol Not treated
Growth protocol None
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, cRNA were hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Normal
Data processing The data were analyzed with robust multi-array (RMA) for background correction, normalization and polishing.
 
Submission date Mar 19, 2007
Last update date Aug 28, 2018
Contact name Richard B Roth
E-mail(s) rroth@neurocrine.com
Organization name Neurocrine Biosciences, Inc.
Department Molecular Medicine
Street address 12790 El Camino Real
City San Diego
State/province CA
ZIP/Postal code 92130
Country USA
 
Platform ID GPL570
Series (1)
GSE7307 Human body index - transcriptional profiling
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
1554096_a_at 7.9631524
235618_at 30.947739
226481_at 88.92618
203075_at 81.41474
236658_at 14.008296
212621_at 16.834826
1557720_s_at 15.5763235
242882_at 14.120826
238622_at 7.9092474
1566288_at 3.8594935
223862_at 15.790665
227982_at 7.7672343
235483_at 19.806885
1566114_at 0.94359756
204150_at 75.475685
201484_at 76.21961
212061_at 28.360966
210092_at 49.54795
205145_s_at 26.283512
221594_at 12.84953

Total number of rows: 54675

Table truncated, full table size 1094 Kbytes.




Supplementary file Size Download File type/resource
GSM176209.CEL.gz 4.5 Mb (ftp)(http) CEL

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