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GEO accession:
Sample GSM180460
Query DataSets for GSM180460
Status
Public on Apr 10, 2007
Title
Hep2_37_rep1
Sample type
RNA
Source name
Hep2 cells heated to 37 degrees rep 1
Organism
Homo sapiens
Characteristics
Cell Culture: Hep2
Biomaterial provider
Jason M Laramie
Treatment protocol
Heated to 37 degrees for 1 hour
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix Protocol
Label
biotin
Label protocol
standard affymetrix labeling protocol
Hybridization protocol
affymetrix protocol
Scan protocol
affymetrix protocol
Description
na
Data processing
MAS5.0
Submission date
Apr 04, 2007
Last update date
Mar 16, 2009
Contact name
Jason Matthew Laramie
E-mail(s)
laramiej@bu.edu
URL
http://www.jason-laramie.com
Organization name
Boston University
Department
Bioinformatics
Street address
715 Albany Street
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platform ID
GPL8300
Series (1)
GSE7458
Transcriptional Profiles of Human Epithelial Cells in Response to Heat
Data table header descriptions
ID_REF
VALUE
relative expression
ABS_CALL
present or absent call
DETECTION P-VALUE
p-value associated with present/absent call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
29.2682
A
0.712257
AFFX-MurIL10_at
14.8827
A
0.60308
AFFX-MurIL4_at
18.022
A
0.712257
AFFX-MurFAS_at
39.1446
A
0.48511
AFFX-BioB-5_at
23.9515
A
0.724854
AFFX-BioB-M_at
7.67247
A
0.984817
AFFX-BioB-3_at
6.15672
A
0.760937
AFFX-BioC-5_at
69.5963
A
0.327079
AFFX-BioC-3_at
8.62848
A
0.989683
AFFX-BioDn-5_at
3.64016
A
0.999246
AFFX-BioDn-3_at
216.219
A
0.440646
AFFX-CreX-5_at
4.77747
A
0.986189
AFFX-CreX-3_at
32.0941
A
0.60308
AFFX-BioB-5_st
74.0776
A
0.227636
AFFX-BioB-M_st
36.2426
A
0.659339
AFFX-BioB-3_st
37.0961
A
0.9273
AFFX-BioC-5_st
20.9355
A
0.921998
AFFX-BioC-3_st
11.2641
A
0.659339
AFFX-BioDn-5_st
44.6281
A
0.544587
AFFX-BioDn-3_st
23.5478
A
0.544587
Total number of rows:
12625
Table truncated, full table size
357 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM180460.CEL.gz
2.9 Mb
(ftp)
(http)
CEL
GSM180460.CHP.gz
5.0 Mb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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