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GEO accession:
Sample GSM180465
Query DataSets for GSM180465
Status
Public on Apr 10, 2007
Title
Hep2_40_rep1
Sample type
RNA
Source name
Hep2 cells heated to 40 degrees rep 1
Organism
Homo sapiens
Characteristics
Cell Culture: Hep2
Biomaterial provider
Jason M Laramie
Treatment protocol
Heated to 40 degrees for 1 hour
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix Protocol
Label
biotin
Label protocol
standard affymetrix labeling protocol
Hybridization protocol
affymetrix protocol
Scan protocol
affymetrix protocol
Description
na
Data processing
MAS5.0
Submission date
Apr 04, 2007
Last update date
Mar 16, 2009
Contact name
Jason Matthew Laramie
E-mail(s)
laramiej@bu.edu
URL
http://www.jason-laramie.com
Organization name
Boston University
Department
Bioinformatics
Street address
715 Albany Street
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platform ID
GPL8300
Series (1)
GSE7458
Transcriptional Profiles of Human Epithelial Cells in Response to Heat
Data table header descriptions
ID_REF
VALUE
relative expression
ABS_CALL
present or absent call
DETECTION P-VALUE
p-value associated with present/absent call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
135.861
A
0.5
AFFX-MurIL10_at
13.981
A
0.631562
AFFX-MurIL4_at
20.8074
A
0.455413
AFFX-MurFAS_at
34.7168
A
0.631562
AFFX-BioB-5_at
78.2228
A
0.51489
AFFX-BioB-M_at
5.82401
A
0.997725
AFFX-BioB-3_at
2.28471
A
0.783476
AFFX-BioC-5_at
57.9479
A
0.354453
AFFX-BioC-3_at
4.63012
A
0.996405
AFFX-BioDn-5_at
1.96915
A
0.997444
AFFX-BioDn-3_at
181.542
A
0.52976
AFFX-CreX-5_at
1.76329
A
0.997444
AFFX-CreX-3_at
8.98002
A
0.860518
AFFX-BioB-5_st
56.5644
A
0.287743
AFFX-BioB-M_st
30.439
A
0.58862
AFFX-BioB-3_st
25.4862
A
0.945787
AFFX-BioC-5_st
11.9433
A
0.932322
AFFX-BioC-3_st
6.91984
A
0.645547
AFFX-BioDn-5_st
90.2529
A
0.48511
AFFX-BioDn-3_st
118.787
A
0.227636
Total number of rows:
12625
Table truncated, full table size
357 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM180465.CEL.gz
2.8 Mb
(ftp)
(http)
CEL
GSM180465.CHP.gz
4.8 Mb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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