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Status
Public on Feb 05, 2008
Title
Caudate-putamen
Sample type
SAGE
Anchor
Sau3A
Tag Count
73657
Tag Length
10
Source name
Wild-type mouse caudate-putamen
Organism
Mus musculus Characteristics
Strain: C57BL/6; Gender: male; Age: 8-12 weeks; Tissue: brain, caudate-putamen
Extracted molecule
polyA RNA
Extraction protocol
Virlon B, Cheval L, Buhler JM, Billon E, Doucet A, Elalouf JM. 1999. Serial microanalysis of renal transcriptomes. Proc Natl Acad Sci U S A. 96:15286-91.
Description
Data provided after linker removal.
Submission date
Apr 24, 2007
Last update date
Nov 19, 2008
Contact name
Jean-Marc Elalouf
E-mail(s)
jean-marc.elalouf@cea.fr Phone
(33) 1 69088022
Fax
(33) 1 69084712
Organization name
CEA Saclay
Department
IBITEC-S
Lab
Laboratoire de PhysioGénomique
Street address
City
91191 Gif/ Yvette Cedex
ZIP/Postal code
91191
Country
France
Platform ID
GPL275 Series (1)
GSE7594 SAGE analysis of wild-type mouse brain regions
Data table header descriptions TAG COUNT TPM tags per million
Data table TAG COUNT TPM TGCTTCAATA
4028
54685.91
AACTTATACA
1500
20364.66
AACAAATCTC
1021
13861.55
TTAAAAAAAA
975
13237.03
TTTATAATTT
919
12476.75
AAACAACCCA
783
10630.35
AAACTTTACC
615
8349.51
AACATTCCTT
506
6869.68
TGACTCCCTC
353
4792.48
TGAGTTCAGA
343
4656.72
TTTGCCGGCA
272
3692.79
TAACCATAGC
265
3597.76
CCACTGCACA
258
3502.72
GCCAAGTTCA
257
3489.15
ATGCAGACTG
225
3054.70
TGATGCCCTC
213
2891.78
AGAGAAGCAG
210
2851.05
AGACAGTCTT
205
2783.17
TGACGCCCTC
202
2742.44
ACAGTCCTAG
179
2430.18
25114 468 Kbytes .Supplementary data files not provided Processed data included within Sample table
