|
| Status |
Public on Feb 15, 2016 |
| Title |
Daughter of Patient 2 |
| Sample type |
genomic |
| |
|
| Source name |
Blood
|
| Organism |
Homo sapiens |
| Characteristics |
gender: female
|
| Treatment protocol |
Not applicable
|
| Growth protocol |
Not applicable
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted from peripheral blood of patients, mother of Patient 2 and four children and from breast tumor tissue (Patient 2) using the standard protocol of Gentra Puregene Blood Kit (Qiagen, Valencia, Ca, USA)
|
| Label |
biotin
|
| Label protocol |
Performed following CytoScan Assay User Manual (P/N 703038 Ver.4)
|
| |
|
| Hybridization protocol |
Performed following CytoScan Assay User Manual (P/N 703038 Ver.4)
|
| Scan protocol |
GeneChips were scanned using the Affymetrix GeneChip® Scanner 3000 7G
|
| Description |
germline alterations
|
| Data processing |
The data were analyzed with the standard parameters of Chromosome Analysis Suite (ChAS) v3.1 software (Affymetrix)
|
| |
|
| Submission date |
Jan 22, 2016 |
| Last update date |
Feb 16, 2016 |
| Contact name |
Rolando Andre Rios Villacis |
| E-mail(s) |
rolando.andre@unb.br
|
| Phone |
+5561996912223
|
| Organization name |
University of Brasília - UnB
|
| Department |
Genetics and Morphology
|
| Lab |
Genetic Toxicology
|
| Street address |
Asa Norte
|
| City |
Brasília |
| State/province |
DF |
| ZIP/Postal code |
70910-900 |
| Country |
Brazil |
| |
|
| Platform ID |
GPL16131 |
| Series (1) |
| GSE77138 |
Large genomic alteration of 7q in two patients with multiple primary cancers, including triple negative breast cancer, and family history of malignant neoplasms |
|
