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GEO accession:
Sample GSM206027
Query DataSets for GSM206027
Status
Public on Jun 30, 2007
Title
Fat Pair-Fed Repl3
Sample type
RNA
Source name
Subcutaneous Fat
Organism
Rattus norvegicus
Characteristics
Adult Male Sprague-Dawley
Biomaterial provider
Meguid
Treatment protocol
Pair-Fed
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy
Label
Biotin
Label protocol
Nugen WT Ovation
Hybridization protocol
Affymetrix FS450_0004
Scan protocol
Affymetrix GeneChip Scanner 3000 7G Default
Description
1 of 3 replicates in treatment group
Data processing
MAS5/GCOS
Submission date
Jun 27, 2007
Last update date
Aug 14, 2011
Contact name
Frank A Middleton
E-mail(s)
middletf@upstate.edu
Phone
315-464-7721
Organization name
SUNY Upstate Medical Univ
Department
Neuroscience and Physiology
Street address
505 Irving Avenue
City
Syracuse
State/province
NY
ZIP/Postal code
13210
Country
USA
Platform ID
GPL1355
Series (1)
GSE8314
Characterization of weight loss and weight regain mechanisms after Roux-en-Y gastric bypass in rats
Data table header descriptions
ID_REF
VALUE
GCOS Signal Value
ABS_CALL
GCOS Present, Marginal, or Absent
DETECTION P-VALUE
GCOS P value for ABS_CALL
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
3661.19
P
4.42873e-05
AFFX-BioB-M_at
5674.28
P
4.42873e-05
AFFX-BioB-3_at
5789.88
P
4.42873e-05
AFFX-BioC-5_at
9049.48
P
4.42873e-05
AFFX-BioC-3_at
5757.65
P
4.42873e-05
AFFX-BioDn-5_at
21724.4
P
4.42873e-05
AFFX-BioDn-3_at
41844.4
P
4.42873e-05
AFFX-CreX-5_at
77293.1
P
4.42873e-05
AFFX-CreX-3_at
85322.9
P
4.42873e-05
AFFX-DapX-5_at
10.1491
A
0.659352
AFFX-DapX-M_at
9.55154
A
0.574038
AFFX-DapX-3_at
8.15182
A
0.631573
AFFX-LysX-5_at
45.5146
A
0.195266
AFFX-LysX-M_at
7.97247
A
0.737173
AFFX-LysX-3_at
34.4608
A
0.300527
AFFX-PheX-5_at
44.9423
A
0.470241
AFFX-PheX-M_at
4.92854
A
0.953533
AFFX-PheX-3_at
47.8682
A
0.313723
AFFX-ThrX-5_at
7.31229
A
0.794288
AFFX-ThrX-M_at
39.4073
A
0.440646
Total number of rows:
31099
Table truncated, full table size
950 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM206027.CEL.gz
2.2 Mb
(ftp)
(http)
CEL
GSM206027.CHP.gz
168.9 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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