NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM242068 Query DataSets for GSM242068
Status Public on Dec 05, 2007
Title non-demented individual with intermediate Alzheimer's pathologies - superior frontal gyrus 3
Sample type RNA
 
Source name superior frontal gyrus 3
Organism Homo sapiens
Characteristics superior frontal gyrus: layer III non-tangle bearing neurons
Extracted molecule total RNA
Extraction protocol Arcturus PicoPure RNA isolation kit
Label biotin
Label protocol Affymetrix double round amplification protocol
 
Hybridization protocol Affymetrix manufacturer's protocol
Scan protocol Affymetrix manufacturer's protocol
Description Affymetrix Human Genome U133 Plus 2.0 array
Data processing MAS 5.0; target intensity scaling to 150
 
Submission date Nov 09, 2007
Last update date Jun 26, 2019
Contact name Winnie Liang
E-mail(s) wliang@tgen.org
Organization name Translational Genomics
Street address 445 N. Fifth Street
City Phoenix
State/province AZ
ZIP/Postal code 85012
Country USA
 
Platform ID GPL570
Series (1)
GSE9770 Non-demented individuals with intermediate Alzheimer's neuropathologies - neuronal expression (6 regions)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087
Reanalyzed by GSE133349

Data table header descriptions
ID_REF
VALUE expression signal
ABS_CALL absent, marginal, present
DETECTION P-VALUE significance of absent/marginal/absent call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1726.39 P 4.42873e-05
AFFX-BioB-M_at 2658.74 P 4.42873e-05
AFFX-BioB-3_at 1551.35 P 4.42873e-05
AFFX-BioC-5_at 4758.84 P 4.42873e-05
AFFX-BioC-3_at 4964.56 P 4.42873e-05
AFFX-BioDn-5_at 12251.8 P 4.42873e-05
AFFX-BioDn-3_at 16810.3 P 4.42873e-05
AFFX-CreX-5_at 49580.2 P 5.16732e-05
AFFX-CreX-3_at 52914.2 P 4.42873e-05
AFFX-DapX-5_at 768.161 P 8.14279e-05
AFFX-DapX-M_at 5142.76 P 4.42873e-05
AFFX-DapX-3_at 19566.4 P 4.42873e-05
AFFX-LysX-5_at 91.3271 P 0.0103112
AFFX-LysX-M_at 909.325 P 0.00010954
AFFX-LysX-3_at 4350.15 P 5.16732e-05
AFFX-PheX-5_at 441.893 P 4.42873e-05
AFFX-PheX-M_at 2021.06 P 4.42873e-05
AFFX-PheX-3_at 4329.48 P 4.42873e-05
AFFX-ThrX-5_at 177.447 P 0.000194887
AFFX-ThrX-M_at 925.162 P 4.42873e-05

Total number of rows: 54675

Table truncated, full table size 1619 Kbytes.




Supplementary file Size Download File type/resource
GSM242068.CEL.gz 4.0 Mb (ftp)(http) CEL
GSM242068.CHP.gz 309.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap