|
Status |
Public on Jan 26, 2008 |
Title |
E1; PATIENT_ID: PA16; CONDITION: co-cultured, E2, PG |
Sample type |
RNA |
|
|
Source name |
Breast
|
Organism |
Homo sapiens |
Characteristics |
SAMPLE_NAME: E1 PATIENT_ID: PA16 CONDITION: co-cultured, 17-beta estradiol (E2), progesterone (PG)
|
Extracted molecule |
total RNA |
Extraction protocol |
total epithelial cell RNA was directly extracted from duplicate wells of each treatment using the Rneasy kit (Qiagen)
|
Label |
biotin
|
Label protocol |
cRNA synthesis was performed with 2 µg of total cellular RNA, and labelled based on the protocol outlined by Affymetrix Inc. (Santa Clara, CA), with few modifications
|
|
|
Hybridization protocol |
standard Affymetrix procedure
|
Scan protocol |
standard Affymetrix procedure
|
Description |
Breast epithelial cells from contralateral breast tissue of patients diagnosed with a primary breast lesion
|
Data processing |
dChip
|
|
|
Submission date |
Jan 24, 2008 |
Last update date |
Aug 28, 2018 |
Contact name |
Junhee Seok |
E-mail(s) |
jseok@stanford.edu
|
Organization name |
Stanford University
|
Street address |
318 Campus Drive W310 - Davis Lab
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305 |
Country |
USA |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE10270 |
Bisphenol A induces a profile of tumor aggressiveness in high-risk cells of breast cancer patients |
|
Relations |
Reanalyzed by |
GSE64985 |
Reanalyzed by |
GSE119087 |