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Sample GSM26494 Query DataSets for GSM26494
Status Public on Oct 03, 2004
Title A549 TNF+Stretch Oct 20 2002
Sample type RNA
 
Source name alveolar epithelial cell line exposed to TNF (20ng/ml) and cyclic stretch (20% elongation) for 1hr
Organism Homo sapiens
Extracted molecule total RNA
 
Description A549 a pulmonary alveolar epithelial cell line was used in mechanical stretch and parenchymal cell activation experiments. Cells were grown in flexercell plates coated with collagen I, and allowed to grow O/N. Cells were then exposed to TNF alpha 20ng/ml stimulation + cyclic stretch (20% elongation) for 1hr or 4hrs. Two replicates for each time point were performed. This is the first replicate for the 1hr time point. Experiemnt was carried out Oct 20 2002
Keywords = A549 cells RNA
Keywords = mechanical stretch
 
Submission date Jul 04, 2004
Last update date May 27, 2005
Contact name Claudia Chimisso dos Santos
E-mail(s) dossantosc@smh.toronto.on.ca
Phone (416)340-4800 ext 6596
Fax (416) 340-4638
Organization name Toronto General Research Institute
Department Critical Care
Lab Thoracic Surgery Research
Street address 200, Elizabeth Street
City Toronto
State/province Ontario
ZIP/Postal code M5G 1C4
Country Canada
 
Platform ID GPL201
Series (1)
GSE1541 A549 parenchymal cell activation

Data table header descriptions
ID_REF
VALUE A549 TNF+STRETCH 1hr Oct 20 2002
ABS_CALL detection call
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 164.9 P 0.000509
AFFX-BioB-M_at 273.6 P 0.00034
AFFX-BioB-3_at 105.2 P 0.001248
AFFX-BioC-5_at 408 P 0.000195
AFFX-BioC-3_at 318.9 P 0.000052
AFFX-BioDn-5_at 333.1 P 0.000052
AFFX-BioDn-3_at 2105.7 P 0.00007
AFFX-CreX-5_at 3078.9 P 0.000044
AFFX-CreX-3_at 4823.9 P 0.000044
AFFX-HUMISGF3A/M97935_5_at 48.9 P 0.003212
AFFX-HUMISGF3A/M97935_MA_at 268.1 P 0.00034
AFFX-HUMISGF3A/M97935_MB_at 138.4 P 0.000052
AFFX-HUMISGF3A/M97935_3_at 442.8 P 0.000081
AFFX-HUMRGE/M10098_5_at 1.6 A 0.973889
AFFX-HUMRGE/M10098_M_at 4.5 A 0.724854
AFFX-HUMRGE/M10098_3_at 18.7 A 0.51489
AFFX-HUMGAPDH/M33197_5_at 7399.8 P 0.000044
AFFX-HUMGAPDH/M33197_M_at 7733.4 P 0.000044
AFFX-HUMGAPDH/M33197_3_at 6949.4 P 0.000044
AFFX-HSAC07/X00351_5_at 3439.9 P 0.000052

Total number of rows: 8793

Table truncated, full table size 228 Kbytes.




Supplementary file Size Download File type/resource
GSM26494.CEL.gz 1.3 Mb (ftp)(http) CEL
GSM26494.EXP.gz 477 b (ftp)(http) EXP

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