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Sample GSM287992 Query DataSets for GSM287992
Status Public on Dec 01, 2008
Title Saccharomyces cerevisiae; alpha-factor arrested
Sample type RNA
 
Source name Total RNA from alpha-factor arrested cells
Organism Saccharomyces cerevisiae
Characteristics Strain info: MATa ura3Δ0 leu2Δ0 his3Δ1 met15Δ0 bar1Δ::KanMX
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using hot acidic phenol. 50 ug of total RNA was treated with Turbo Dnase (Ambion), and checked for integrity using a Bioanalyzer 2100 (Agilent).
Label biotin
Label protocol According to Affymetrix protocol included with Yeast 2.0 arrays.
 
Hybridization protocol According to Affymetrix protocol included with Yeast 2.0 arrays.
Scan protocol According to Affymetrix protocol included with Yeast 2.0 arrays.
Description Total RNA extracted from alpha-factor arrested cells.
Data processing Raw data was normalized using the affy package from Bioconductor.
 
Submission date May 11, 2008
Last update date Jun 21, 2008
Contact name Jay R. Hesselberth
E-mail(s) jay.hesselberth@cuanschutz.edu
Organization name University of Colorado School of Medicine
Department Biochemistry and Molecular Gentetics
Lab Jay Hesselberth
Street address 12801 E 17TH AVE
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platform ID GPL2529
Series (1)
GSE11412 Alpha-factor treatment of Saccharomyces cerevisiae

Data table header descriptions
ID_REF
VALUE RMA

Data table
ID_REF VALUE
AFFX-Scv2-r2-Bs-lys-M_at 13.13258717
AFFX-r2-Bs-lys-M_at 12.36209253
AFFX-Scv2-r2-Bs-lys-5_at 12.28287903
AFFX-r2-Bs-lys-5_at 12.00548354
AFFX-r2-Bs-lys-3_at 12.26719358
AFFX-LysX-M_at 12.20677275
AFFX-LysX-5_at 11.76678928
1779702_at 12.6842265
AFFX-Scv2-r2-Bs-lys-3_at 12.18549482
AFFX-LysX-3_at 12.70481203
1772608_at 14.39874915
1773145_s_at 13.32377281
1774769_at 13.35165282
1777384_at 13.08378973
1772126_at 14.31164769
1775220_at 13.928367
1777860_at 14.14483909
1779369_at 11.23712476
1775893_at 13.4748863
1778437_at 13.54623563

Total number of rows: 10928

Table truncated, full table size 246 Kbytes.




Supplementary file Size Download File type/resource
GSM287992.CEL.gz 1.1 Mb (ftp)(http) CEL
GSM287992.CHP.gz 56.6 Kb (ftp)(http) CHP
Processed data included within Sample table

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